Summary
Age: 18,330.6 ± 6,095.1; CI=95% (Behar et al., 2012b)
Origin: Undetermined
Variants: T1005C T1824C A7828G T10535C G10586A T12338C G13708A
FTDNA Tree: Link
Parent Branch: F
Descendant branch(s): F2a F2b F2c F2d F2e F2f F2g F2h F2i
YFull Info
Name: F2Age: 39100 to 28200 ybp [95% CI]
Expansion: 21400 to 15900 ybp [95% CI]
Variants: T1005C T1824C A7828G T10535C G10586A T12338C G13708A
Note: This information does not imply an endorsement of YFull or their methods. It is provided at the request of readers.
Haplogroup F2 is a branch on the maternal tree of human kind. The woman who founded this line lived between 12,200 and 24,400 years ago (Behar et al 2012b).
mtDNA Haplogroup F2 Phylotree History
Phylotree.org is the maternal (mtDNA) tree of humanity. It is maintained by Dr. Mannis Van Oven. Each build is a major update to the tree. The current build is #17.
| Build# | Called | Variants (Mutations) | Notes |
|---|---|---|---|
| 01 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 27 Aug 2008 |
| 02 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 14 Oct 2008 |
| 03 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 1 Mar 2009 |
| 05 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 8 Jul 2009 |
| 06 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 28 Sep 2009 |
| 07 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 10 Nov 2009 |
| 08 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 21 Mar 2010 |
| 09 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 20 Jun 2010 |
| 10 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 10 Aug 2010 |
| 11 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 7 Feb 2011 |
| 12 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 20 Jul 2011 |
| 13 | F2 | 1005 1824 7828 10535 10586 12338 13708 | Released 28 Dec 2011; Last Build to use the rCRS |
| 14 | F2 | T1005C T1824C A7828G T10535C G10586A T12338C G13708A | Released 5 Apr 2012; First version to use the RSRS |
| 15 | F2 | T1005C T1824C A7828G T10535C G10586A T12338C G13708A | Released 30 Sep 2012 |
| 16 | F2 | T1005C T1824C A7828G T10535C G10586A T12338C G13708A | Released 19 Feb 2014 |
| 17 | F2 | T1005C T1824C A7828G T10535C G10586A T12338C G13708A | Released 18 Feb 2016 |
mtDNA Haplogroup F2 Data Sources
GenBank Samples
GenBank is a database of genetic sequence data. It is run by the United States National Institute of Health. It serves as the main repository for mtDNA full sequence profiles. Samples come both from published academic literature and donations from genetic genealogy community members. In addition to GenBank samples, listings below may include other samples published but not submitted to GenBank such as those from the HapMap project.
Note: GenBank results currently use Phylotree build 16. I am working on changing results over to build 17.
| Hg ID | Origin | Publication | Hg BLD16 | Hg BLD17 | Hg YFull | Missing Variants | Additional Variants |
|---|---|---|---|---|---|---|---|
| Hap5010222 | China, People's Republic of | Jiang et al., 2014 | F2 | F2i | F2:152, 195 | F2:275, 309.1C, 315.1C, 3753, 10084, 11323, 11410, 16221 | |
| Hap5011431 | Ko et al., 2014 | F2 | F2i | F2:152, 195, 249d | F2:275, 3753, 5821, 9452, 10084, 11323, 11410, 16221 | ||
| Hap5016446 | Ji F et al., 2012 | F2 | F2h* | F2:195, 16189 | F2:5744, 9612C, 10005, 11696, 14002, 14560, 15171, 15862, 16357, 16519 | ||
| Hap5016765 | Yu et al., 2010a | F2 | F2h* | F2:195 | F2:315.1C, 3460, 9612C, 10005, 11696, 14002, 14560, 15862, 16519 | ||
| Hap5022594 | Zheng et al., 2011 | F2 | F2:152, 195 | F2:275, 3753, 10084, 11323, 11410, 16221 |
Sources & Resources
Related Sources
- Behar, D.M., van Oven, M., Rosset, S., Metspalu, M., Loogväli, E.L., Silva, N.M., Kivisild, T., Torroni, A. and Villems, R. (2012). A “Copernican” reassessment of the human mitochondrial DNA tree from its root. American journal of human genetics, 90(4), 675-684.
- Fan, L., & Yao, Y. G. (2011). MitoTool: a web server for the analysis and retrieval of human mitochondrial DNA sequence variations. Mitochondrion, 11(2), 351-356.
- Fan, L., & Yao, Y. G. (2013). An update to MitoTool: using a new scoring system for faster mtDNA haplogroup determination. Mitochondrion, 13(4), 360-363.
- Ji, F., Sharpley, M.S., Derbeneva, O., Alves, L.S., Qian, P., Wang, Y., Chalkia, D., Lvova, M., Xu, J., Yao, W. and Simon, M. (2012). Mitochondrial DNA variant associated with Leber hereditary optic neuropathy and high-altitude Tibetans. Proceedings of the National Academy of Sciences, 109(19), 7391-7396.
- - (2014). A Direct Submission to GenBank by Jiang et al., in 2014. , unpublished, unpublished.
- Ko, A.M.S., Chen, C.Y., Fu, Q., Delfin, F., Li, M., Chiu, H.L., Stoneking, M. and Ko, Y.C. (2014). Early Austronesians: Into and Out Of Taiwan. American journal of human genetics, 94(3), 426-436.
- Van Oven, M., & Kayser, M. (2009). Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. Human mutation, 30(2), E386-E394.
- Yu, D., Jia, X., Zhang, A.M., Guo, X., Zhang, Y.P., Zhang, Q. and Yao, Y.G. (2010). Molecular characterization of six Chinese families with m.3460G>A and Leber hereditary optic neuropathy. Neurogenetics, 11(3), 349-356.
- Zheng, H.X., Yan, S., Qin, Z.D., Wang, Y., Tan, J.Z., Li, H. and Jin, L. (2011). Major Population Expansion of East Asians Began before Neolithic Time: Evidence of mtDNA Genomes. PLoS ONE, 6(10), e25835+.
Additional Resources
- Ian Logan’s mtDNA Pages
- Ian Logan’s Instructions for mtGenome Genbank Donation
- James Lick’s mtDNA Utility
- The Wikipedia Article for Haplogroup F
mtDNA Consultants
The following members of the community offer paid consulting for those seeking help with mtDNA results. Inclusion on this list is not a recommendation or endorsement of any service.
Keywords
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