Summary
Age: Undetermined
Origin: Undetermined
Mutations: C182T!! T217C T16223C
FTDNA Tree: Link
Parent Branch: D5c1
Descendant branch(s):
Background
Haplogroup D5c1a is a branch on the maternal tree of humanity.
mtDNA Haplogroup D5c1a Phylotree History
Phylotree.org is the maternal (mtDNA) tree of humanity. It is maintained by Dr. Mannis Van Oven. Each build is a major update to the tree. The current build is #17.
| Build# | Called | Mutations | Notes |
|---|---|---|---|
| 16 | D5c1a | C182T!! T217C T16223C | Released 19 Feb 2014 |
| 17 | D5c1a | C182T!! T217C T16223C | Released 18 Feb 2016 |
mtDNA Haplogroup D5c1a Data Sources
GenBank Samples
GenBank is a database of genetic sequence data. It is run by the United States National Institute of Health. It serves as the main repository for mtDNA full sequence profiles. Samples come both from published academic literature and donations from genetic genealogy community members. In addition to GenBank samples, listings below may include other samples published but not submitted to GenBank such as those from the HapMap project.
Note: GenBank results currently use Phylotree build 16. I am working on changing resuts over to build 17.
| Hg ID | Publication | Missing Variants | Additional Variants |
|---|---|---|---|
| Hap5001511 | Behar et al., 2012b | none | D5c1a:315.1C, 1802R, 16093Y, 16193.1CC |
| Hap5010083 | Ingman et al., 2000 | D5c1a:16129 | D5c1a:185, 309.1C, 315.1C, 16193.1CC |
| Hap5010214 | Jiang et al., 2014 | none | D5c1a:315.1C, 3768, 9139, 13104, 16193.1CC |
| Hap5010300 | Jiang et al., 2014 | D5c1a:11914, 16362 | D5c1a:315.1C, 523-524d, 5585, 7133A, 8764, 12444, 16193.1CC, 16293C, 16296.1C, 16465 |
| Hap5011324 | Ko et al., 2014 | D5c1a:182, 16190 | D5c1a:3395, 16189 |
| Hap5011994 | Mikami et al., 2013 | none | D5c1a:309.1C, 315.1C, 16093, 16193.1CC |
| Hap5014842 | Tanaka et al., 2004 | none | D5c1a:315.1C, 16093, 16193.1CC |
| Hap5015151 | Tanaka et al., 2004 | none | D5c1a:309.1CC, 315.1C, 15928, 16193.1CC |
| Hap5015298 | Ueno et al., 2009 | none | D5c1a:315.1C, 9554, 16093, 16193.1CC |
| Hap5015498 | Volodko et al., 2008 | D5c1a:16129 | D5c1a:185, 315.1C, 16193.1CC |
| Hap5015499 | Volodko et al., 2008 | D5c1a:16129, 16311 | D5c1a:185, 315.1C, 16193.1CC |
| Hap5016177 | Sukernik et al., 2012 | D5c1a:5178A, 16129 | D5c1a:185, 16193.1CC |
| Hap5022560 | Zheng et al., 2011 | D5c1a:16190, 16390 | D5c1a:4659, 5261, 10873N, 12705N, 14696, 15128, 15529, 16189N |
| Hap5022561 | Zheng et al., 2011 | none | D5c1a:16093, 16193.1CC, 16325 |
Geno 2.0 Data
Data from Geno 2.0 is derived from the The National Geographic Society’s Genographic Project — the DAR. The Hg ID is specific to this site and is used to protect the identities of those who take part in Genographic research. Birth Country, Mother's Birth Country, and Maternal Grandmother's Birth Country have been normalized from DAR database fields. The Maternal Origin is determined based on the three previous fields.
Note: Geno 2.0 results currently use Phylotree build 16. I am working on changing resuts over to build 17.
| Hg ID | Birth Country | Mother's Birth Country | Maternal Grandmother's Birth Country | Maternal Origin |
|---|---|---|---|---|
| Hap10046833 | United States | China | China | China |
| Hap10046834 | Japan | Japan | Japan | Japan |
| Hap10046835 | Japan | Japan | Japan | Japan |
| Hap10046836 | United States | Taiwan | Taiwan | Taiwan |
If you use the information in this table, please credit both this site and The National Geographic Society’s Genographic Project.
Sources & Resources
Related Sources
- Behar, D.M., van Oven, M., Rosset, S., Metspalu, M., Loogväli, E.L., Silva, N.M., Kivisild, T., Torroni, A. and Villems, R. (2012). A “Copernican” reassessment of the human mitochondrial DNA tree from its root. American journal of human genetics, 90(4), 675-684.
- Fan, L., & Yao, Y. G. (2011). MitoTool: a web server for the analysis and retrieval of human mitochondrial DNA sequence variations. Mitochondrion, 11(2), 351-356.
- Fan, L., & Yao, Y. G. (2013). An update to MitoTool: using a new scoring system for faster mtDNA haplogroup determination. Mitochondrion, 13(4), 360-363.
- Ingman, M., Kaessmann, H., Pääbo, S., & Gyllensten, U. (2000). Mitochondrial genome variation and the origin of modern humans. Nature, 408(6813), 708-713.
- - (2014). A Direct Submission to GenBank by Jiang et al., in 2014. , unpublished, unpublished.
- Ko, A.M.S., Chen, C.Y., Fu, Q., Delfin, F., Li, M., Chiu, H.L., Stoneking, M. and Ko, Y.C. (2014). Early Austronesians: Into and Out Of Taiwan. American journal of human genetics, 94(3), 426-436.
- Mikami, E., Fuku, N., Kong, Q.P., Takahashi, H., Ohiwa, N., Murakami, H., Miyachi, M., Higuchi, M., Tanaka, M., Pitsiladis, Y.P. and Kawahara, T. (2013). Comprehensive analysis of common and rare mitochondrial DNA variants in elite Japanese athletes: a case–control study. Journal of human genetics, 58(12), 780-787.
- Sukernik, Rem I.; Volodko, Natalia V.; Mazunin, Ilya O.; Eltsov, Nikolai P.; Dryomov, Stanislav V. & Starikovskaya, Elena B. (2012). Mitochondrial genome diversity in the tubalar, even, and ulchi: Contribution to prehistory of native siberians and their affinities to native americans. American Journal of Physical Anthropology, 148(1), 123-138.
- Tanaka, M., Cabrera, V.M., González, A.M., Larruga, J.M., Takeyasu, T., Fuku, N., Guo, L.J., Hirose, R., Fujita, Y., Kurata, M. & Shinoda, K.I. (2004). Mitochondrial Genome Variation in Eastern Asia and the Peopling of Japan. Genome Research, 14(10a), 1832-1850.
- Ueno, H., Nishigaki, Y., Kong, Q.P., Fuku, N., Kojima, S., Iwata, N., Ozaki, N. and Tanaka, M. (2009). Analysis of mitochondrial DNA variants in Japanese patients with schizophrenia. Mitochondrion, 9(6), 385-393.
- Van Oven, M., & Kayser, M. (2009). Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. Human mutation, 30(2), E386-E394.
- Volodko, N.V., Starikovskaya, E.B., Mazunin, I.O., Eltsov, N.P., Naidenko, P.V., Wallace, D.C. and Sukernik, R.I. (2008). Mitochondrial Genome Diversity in Arctic Siberians, with Particular Reference to the Evolutionary History of Beringia and Pleistocenic Peopling of the Americas. American journal of human genetics, 82(5), p10841100.
- Zheng, H.X., Yan, S., Qin, Z.D., Wang, Y., Tan, J.Z., Li, H. and Jin, L. (2011). Major Population Expansion of East Asians Began before Neolithic Time: Evidence of mtDNA Genomes. PLoS ONE, 6(10), e25835+.
Additional Resources
- Ian Logan’s mtDNA Pages
- Ian Logan’s Instructions for mtGenome Genbank Donation
- James Lick’s mtDNA Utility
- The FTDNA Haplogroup Project for Haplogroup D
- The Wikipedia Article for Haplogroup D
mtDNA Consultants
The following members of the community offer paid consulting for those seeking help with mtDNA results. Inclusion on this list is not a recommendation or endorsement of any service.
Keywords
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Last Updated: Last updated: November 30, -0001 at 0:00 am