Haplogroup L0d1a1 is a branch on the maternal tree of humanity.
mtDNA Haplogroup L0d1a1 Phylotree History
Phylotree.org is the maternal (mtDNA) tree of humanity. It is maintained by Dr. Mannis Van Oven. Each build is a major update to the tree. The current build is #17.
|07||L0d1a1||152! 7389 12696||Released 10 Nov 2009|
|08||L0d1a1||152! 7389 12696||Released 21 Mar 2010|
|09||L0d1a1||152! 7389 12696||Released 20 Jun 2010|
|10||L0d1a1||152! 7389 12696||Released 10 Aug 2010|
|11||L0d1a1||152! 7389 12696||Released 7 Feb 2011|
|12||L0d1a1||152! 7389 12696||Released 20 Jul 2011|
|13||L0d1a1||152! 7389 12696||Released 28 Dec 2011; Last Build to use the rCRS|
|14||L0d1a1||C152T T7389C T12696C||Released 5 Apr 2012; First version to use the RSRS|
|15||L0d1a1||C152T T7389C T12696C||Released 30 Sep 2012|
|16||L0d1a1||T199C C12798T (G16266A)||Released 19 Feb 2014|
|17||L0d1a1||T199C C12798T (G16266A)||Released 18 Feb 2016|
mtDNA Haplogroup L0d1a1 Data Sources
GenBank is a database of genetic sequence data. It is run by the United States National Institute of Health. It serves as the main repository for mtDNA full sequence profiles. Samples come both from published academic literature and donations from genetic genealogy community members. In addition to GenBank samples, listings below may include other samples published but not submitted to GenBank such as those from the HapMap project.
Note: GenBank results currently use Phylotree build 16. I am working on changing results over to build 17.
|Hg ID||Origin||Publication||Hg BLD16||Hg BLD17||Hg YFull||Missing Variants||Additional Variants|
|Hap5005763||South Africa||Chan et al., 2015||L0d1a1||L0d1a1d||L0d1a1:2706||L0d1a1:315.1C, 524.1ACAC, 3849, 8793, 16266A|
|Hap5015421||van der Walt et al. 2012||L0d1a1||L0d1a1d||none||L0d1a1:524.1ACAC, 3849, 7055, 7205, 8577, 8793, 16266A|
Sources & Resources
- Behar, D.M., van Oven, M., Rosset, S., Metspalu, M., Loogväli, E.L., Silva, N.M., Kivisild, T., Torroni, A. and Villems, R. (2012). A “Copernican” reassessment of the human mitochondrial DNA tree from its root. American journal of human genetics, 90(4), 675-684.
- Chan, E.K., Hardie, R.A., Petersen, D.C., Beeson, K., Bornman, R.M., Smith, A.B. and Hayes, V.M. (2015). Revised Timeline and Distribution of the Earliest Diverged Human Maternal Lineages in Southern Africa. PLoS ONE, 10(3), e0121223.
- Fan, L., & Yao, Y. G. (2011). MitoTool: a web server for the analysis and retrieval of human mitochondrial DNA sequence variations. Mitochondrion, 11(2), 351-356.
- Fan, L., & Yao, Y. G. (2013). An update to MitoTool: using a new scoring system for faster mtDNA haplogroup determination. Mitochondrion, 13(4), 360-363.
- Van der Walt, E.M., Smuts, I., Taylor, R.W., Elson, J.L., Turnbull, D.M., Louw, R. and van der Westhuizen, F.H. (2012). Characterization of mtDNA variation in a cohort of South African paediatric patients with mitochondrial disease. European Journal of Human Genetics, 20(6), 650-656.
- Van Oven, M., & Kayser, M. (2009). Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. Human mutation, 30(2), E386-E394.
- Ian Logan’s mtDNA Pages
- Ian Logan’s Instructions for mtGenome Genbank Donation
- James Lick’s mtDNA Utility
- The FTDNA Haplogroup Project for Haplogroup L0
- The Wikipedia Article for Haplogroup L0
The following members of the community offer paid consulting for those seeking help with mtDNA results. Inclusion on this list is not a recommendation or endorsement of any service.
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