Sample Details for Hap5023146

ID

Hg ID: Hap5023146, GenBank ID: -

Haplogroup

Phylotree BLD 16: L2a1i, Phylotree BLD 17: , YFull:

Publication

Published in: Howell et al., 2004 | Howell, N., Elson, J. L., Turnbull, D. M., & Herrnstadt, C. (2004). African Haplogroup L mtDNA Sequences Show Violations of Clock-like Evolution. Molecular Biology and Evolution, 21(10), 1843-1854.

A set of 96 complete mtDNA sequences that belong to the three major African haplogroups (L1, L2, and L3) was analyzed to determine if mtDNA has evolved as a molecular clock. Likelihood ratio tests (LRTs) were carried out with each of the haplogroups and with combined haplogroup sequence sets. Evolution has not been clock-like, neither for the coding region nor for the control region, in combined sets of African haplogroup L mtDNA sequences. In tests of individual haplogroups, L2 mtDNAs showed violations of a molecular clock under all conditions and in both the control and coding regions.

Sample source link: http://-/

Origin:

Publication Notes: 388

Results Profile

RSRS Haplotype:

143, 247, 317.1C, 825T, 2416, 2758, 2789, 2885, 4312, 7146, 7175, 7274, 7771, 8206, 8468, 8655, 9221, 10115, 10664, 10688, 10810, 10915, 11944, 12693, 13105, 13276, 13506, 13590, 13803, 14566, 15229, 15301, 15784, 16129, 16187, 16192, 16230, 16294, 16311, 16362, 16390, 16519

rCRS Haplotype:

Coming soon…

FASTA Profile:


Phylotree Build 17 Analysis

Missing Variants: none

Additional Variants: L2a1i:317.1C, 16519


Last Updated: 2016/06/29 10:51:00 PM

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