Sample Details for Hap5022194

ID

Hg ID: Hap5022194, GenBank ID: AY713993.1

Haplogroup

Phylotree BLD 16: R5a2, Phylotree BLD 17: , YFull: R5a2*

Publication

Published in: Palanichamy et al., 2004 | Palanichamy, M.G., Sun, C., Agrawal, S., Bandelt, H.J., Kong, Q.P., Khan, F., Wang, C.Y., Chaudhuri, T.K., Palla, V. and Zhang, Y.P. (2004). Phylogeny of Mitochondrial DNA Macrohaplogroup N in India, Based on Complete Sequencing: Implications for the Peopling of South Asia. American journal of human genetics, 75(6), 966-978.

To resolve the phylogeny of the autochthonous mitochondrial DNA (mtDNA) haplogroups of India and determine the relationship between the Indian and western Eurasian mtDNA pools more precisely, a diverse subset of 75 macrohaplogroup N lineages was chosen for complete sequencing from a collection of >800 control-region sequences sampled across India.

Sample source link: http://www.ncbi.nlm.nih.gov/nuccore/AY713993.1

Origin:

Publication Notes: R96

Results Profile

RSRS Haplotype:

146, 195, 247, 315.1C, 523-524d, 769, 825T, 1018, 1095, 2758, 2885, 3594, 3894, 4104, 4312, 7146, 7256, 7521, 8468, 8594, 8655, 8701, 9540, 10398, 10664, 10688, 10754, 10810, 10873, 10915, 11293, 11914, 12705, 13105, 13276, 13506, 13635, 13650, 13708, 14040, 14544, 15385, 16129, 16187, 16223, 16230, 16256, 16266, 16271, 16278, 16304, 16311, 16356

rCRS Haplotype:

Coming soon…

FASTA Profile:


Phylotree Build 17 Analysis

Missing Variants: R5a2:16189, 16524

Additional Variants: R5a2:315.1C, 523-524d, 1095, 3894, 13708, 16256, 16271


Last Updated: 2016/06/29 10:51:00 PM

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